- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | mdo-mir-96 | mir-96 | mdo-miR-96 | 23/23 | chr8 | - | 19-41 | N/A | - | miRBase_13_0 | 22/32 | 2/38 |
2 | mdo-mir-93 | mir-93 | mdo-miR-93 | 22/22 | chr2 | + | 17-38 | N/A | - | miRBase_13_0 | 17/33 | 2/36 |
3 | mdo-mir-92 | mir-92 | mdo-miR-92 | 21/21 | chr7 | - | 48-68 | N/A | - | miRBase_13_0 | 47/65 | 3/170 |
4 | mdo-mir-9-2 | mir-9 | mdo-miR-9 | 23/23 | chr3 | + | 16-38 | N/A | - | miRBase_13_0 | 41/59 | 6/206 |
5 | mdo-mir-9-2 | mir-9 | mdo-miR-9* | 21/21 | chr3 | + | 54-74 | N/A | - | miRBase_13_0 | 41/59 | 6/206 |
6 | mdo-mir-9-1 | mir-9 | mdo-miR-9* | 21/21 | chr1 | - | 56-76 | N/A | - | miRBase_13_0 | 41/59 | 6/206 |
7 | mdo-mir-9-1 | mir-9 | mdo-miR-9 | 23/23 | chr1 | - | 16-38 | N/A | - | miRBase_13_0 | 41/59 | 6/206 |
8 | mdo-mir-7 | mir-7 | mdo-miR-7 | 22/22 | chr6 | + | 17-38 | N/A | - | miRBase_13_0 | 46/63 | 6/143 |
9 | mdo-mir-451 | mir-451 | mdo-miR-451 | 22/22 | chr2 | - | 10-31 | N/A | - | miRBase_13_0 | 12/26 | 2/27 |
10 | mdo-mir-449 | mir-449 | mdo-miR-449 | 22/22 | chr3 | - | 11-32 | N/A | - | miRBase_13_0 | 11/22 | 2/42 |
11 | mdo-mir-425 | mir-425 | mdo-miR-425 | 22/22 | chr6 | - | 54-75 | N/A | - | miRBase_13_0 | 10/24 | 2/25 |
12 | mdo-mir-383 | mir-383 | mdo-miR-383 | 22/22 | chr5 | + | 4-25 | N/A | - | miRBase_13_0 | 11/20 | 1/23 |
13 | mdo-mir-375 | mir-375 | mdo-miR-375 | 23/23 | chr7 | + | 38-60 | N/A | - | miRBase_13_0 | 21/44 | 2/50 |
14 | mdo-mir-367 | mir-367 | mdo-miR-367 | 23/23 | chr5 | - | 38-60 | N/A | - | miRBase_13_0 | 9/23 | 2/25 |
15 | mdo-mir-365 | mir-365 | mdo-miR-365 | 22/22 | chr6 | + | 55-76 | N/A | - | miRBase_13_0 | 16/32 | 2/57 |
16 | mdo-mir-34a | mir-34 | mdo-miR-34a | 23/23 | chr4 | + | 22-44 | N/A | - | miRBase_13_0 | 45/67 | 3/144 |
17 | mdo-mir-340 | mir-340 | mdo-miR-340 | 22/22 | chr1 | + | 27-48 | N/A | - | miRBase_13_0 | 8/11 | 4/15 |
18 | mdo-mir-338 | mir-338 | mdo-miR-338 | 23/23 | chr2 | + | 52-74 | N/A | - | miRBase_13_0 | 12/22 | 2/36 |
19 | mdo-mir-32 | mir-32 | mdo-miR-32 | 21/21 | chr6 | + | 6-26 | N/A | - | miRBase_13_0 | 16/30 | 2/31 |
20 | mdo-mir-31 | mir-31 | mdo-miR-31 | 24/24 | chr6 | - | 10-33 | N/A | - | miRBase_13_0 | 40/60 | 2/107 |
21 | mdo-mir-30a | mir-30 | mdo-miR-30a | 22/22 | chr2 | - | 6-27 | N/A | - | miRBase_13_0 | 21/38 | 6/186 |
22 | mdo-mir-302d | mir-302 | mdo-miR-302d | 21/21 | chr5 | - | 44-64 | N/A | - | miRBase_13_0 | 10/25 | 7/92 |
23 | mdo-mir-302c | mir-302 | mdo-miR-302c | 21/21 | chr5 | - | 37-57 | N/A | - | miRBase_13_0 | 10/25 | 7/92 |
24 | mdo-mir-302b | mir-302 | mdo-miR-302b | 20/20 | chr5 | - | 45-64 | N/A | - | miRBase_13_0 | 10/25 | 7/92 |
25 | mdo-mir-302a | mir-302 | mdo-miR-302a | 20/20 | chr5 | - | 45-64 | N/A | - | miRBase_13_0 | 10/25 | 7/92 |
26 | mdo-mir-29b | mir-29 | mdo-miR-29b | 20/20 | chr8 | - | 55-74 | N/A | - | miRBase_13_0 | 28/46 | 6/165 |
27 | mdo-mir-29a | mir-29 | mdo-miR-29a | 20/20 | chr8 | - | 42-61 | N/A | - | miRBase_13_0 | 28/46 | 6/165 |
28 | mdo-mir-27b | mir-27 | mdo-miR-27b | 21/21 | chr6 | + | 61-81 | N/A | - | miRBase_13_0 | 22/38 | 3/81 |
29 | mdo-mir-27a | mir-27 | mdo-miR-27a | 21/21 | chr3 | + | 56-76 | N/A | - | miRBase_13_0 | 22/38 | 3/81 |
30 | mdo-mir-25 | mir-25 | mdo-miR-25 | 22/22 | chr2 | + | 52-73 | N/A | - | miRBase_13_0 | 17/28 | 2/31 |
31 | mdo-mir-24-2 | mir-24 | mdo-miR-24 | 16/16 | chr3 | + | 46-61 | N/A | - | miRBase_13_0 | 19/35 | 3/74 |
32 | mdo-mir-24-1 | mir-24 | mdo-miR-24 | 16/16 | chr6 | + | 40-55 | N/A | - | miRBase_13_0 | 19/35 | 3/74 |
33 | mdo-mir-23b | mir-23 | mdo-miR-23b | 21/21 | chr6 | + | 46-66 | N/A | - | miRBase_13_0 | 22/39 | 4/78 |
34 | mdo-mir-23a | mir-23 | mdo-miR-23a | 20/20 | chr3 | + | 42-61 | N/A | - | miRBase_13_0 | 22/39 | 4/78 |
35 | mdo-mir-223 | mir-223 | mdo-miR-223 | 21/21 | chrX | - | 72-92 | N/A | - | miRBase_13_0 | 18/31 | 2/34 |
36 | mdo-mir-222a | mir-222 | mdo-miR-222a | 24/24 | chr4 | + | 27-50 | N/A | - | miRBase_13_0 | 14/31 | 2/40 |
37 | mdo-mir-221 | mir-221 | mdo-miR-221 | 23/23 | chr4 | + | 47-69 | N/A | - | miRBase_13_0 | 18/27 | 2/31 |
38 | mdo-mir-22 | mir-22 | mdo-miR-22 | 22/22 | chr2 | - | 51-72 | N/A | - | miRBase_13_0 | 23/37 | 2/51 |
39 | mdo-mir-219 | mir-219 | mdo-miR-219 | 21/21 | chr1 | - | 16-36 | N/A | - | miRBase_13_0 | 38/52 | 3/89 |
40 | mdo-mir-218 | mir-218 | mdo-miR-218 | 21/21 | chr5 | - | 24-44 | N/A | - | miRBase_13_0 | 22/40 | 3/82 |
41 | mdo-mir-217 | mir-217 | mdo-miR-217 | 24/24 | chr1 | + | 14-37 | N/A | - | miRBase_13_0 | 20/37 | 2/47 |
42 | mdo-mir-216 | mir-216 | mdo-miR-216 | 21/21 | chr1 | + | 19-39 | N/A | - | miRBase_13_0 | 24/39 | 1/67 |
43 | mdo-mir-214 | mir-214 | mdo-miR-214 | 21/21 | chr2 | - | 71-91 | N/A | - | miRBase_13_0 | 21/39 | 2/41 |
44 | mdo-mir-212 | mir-212 | mdo-miR-212 | 21/21 | chr2 | - | 56-76 | N/A | - | miRBase_13_0 | 11/15 | 2/21 |
45 | mdo-mir-21 | mir-21 | mdo-miR-21 | 22/22 | chr2 | - | 8-29 | N/A | - | miRBase_13_0 | 20/35 | 2/41 |
46 | mdo-mir-208 | mir-208 | mdo-miR-208 | 22/22 | chr1 | - | 50-71 | N/A | - | miRBase_13_0 | 10/20 | 1/27 |
47 | mdo-mir-206 | mir-206 | mdo-miR-206 | 21/21 | chr2 | + | 45-65 | N/A | - | miRBase_13_0 | 14/30 | 2/41 |
48 | mdo-mir-204 | mir-204 | mdo-miR-204 | 22/22 | chr1 | - | 25-46 | N/A | - | miRBase_13_0 | 20/29 | 2/38 |
49 | mdo-mir-203 | mir-203 | mdo-miR-203 | 22/22 | chr1 | - | 53-74 | N/A | - | miRBase_13_0 | 12/21 | 2/25 |
50 | mdo-mir-200c | mir-200 | mdo-miR-200c | 22/22 | chr8 | + | 44-65 | N/A | - | miRBase_13_0 | 21/37 | 6/88 |
51 | mdo-mir-200b | mir-200 | mdo-miR-200b | 22/22 | chr4 | + | 39-60 | N/A | - | miRBase_13_0 | 21/37 | 6/88 |
52 | mdo-mir-200a | mir-200 | mdo-miR-200a | 22/22 | chr4 | + | 51-72 | N/A | - | miRBase_13_0 | 21/37 | 6/88 |
53 | mdo-mir-200a | mir-200 | mdo-miR-200a* | 22/22 | chr4 | + | 14-35 | N/A | - | miRBase_13_0 | 21/37 | 6/88 |
54 | mdo-mir-20 | mir-20 | mdo-miR-20 | 23/23 | chr7 | - | 24-46 | N/A | - | miRBase_13_0 | 24/42 | 5/98 |
55 | mdo-mir-19b | mir-19 | mdo-miR-19b | 23/23 | chr7 | - | 55-77 | N/A | - | miRBase_13_0 | 25/43 | 4/128 |
56 | mdo-mir-19a | mir-19 | mdo-miR-19a | 23/23 | chr7 | - | 49-71 | N/A | - | miRBase_13_0 | 25/43 | 4/128 |
57 | mdo-mir-199b | mir-199 | mdo-miR-199b | 23/23 | chr1 | - | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 4/87 |
58 | mdo-mir-196b | mir-196 | mdo-miR-196b | 21/21 | chr8 | + | 16-36 | N/A | - | miRBase_13_0 | 20/38 | 3/91 |
59 | mdo-mir-193 | mir-193 | mdo-miR-193 | 21/21 | chr2 | - | 41-61 | N/A | - | miRBase_13_0 | 19/36 | 3/55 |
60 | mdo-mir-191 | mir-191 | mdo-miR-191 | 22/22 | chr6 | - | 7-28 | N/A | - | miRBase_13_0 | 10/22 | 2/23 |
61 | mdo-mir-187 | mir-187 | mdo-miR-187 | 20/20 | chr3 | + | 51-70 | N/A | - | miRBase_13_0 | 17/29 | 2/32 |
62 | mdo-mir-186 | mir-186 | mdo-miR-186 | 23/23 | chr2 | + | 7-29 | N/A | - | miRBase_13_0 | 12/24 | 2/29 |
63 | mdo-mir-184 | mir-184 | mdo-miR-184 | 22/22 | chr1 | - | 53-74 | N/A | - | miRBase_13_0 | 40/54 | 2/73 |
64 | mdo-mir-183 | mir-183 | mdo-miR-183 | 23/23 | chr8 | - | 15-37 | N/A | - | miRBase_13_0 | 25/42 | 2/51 |
65 | mdo-mir-182 | mir-182 | mdo-miR-182 | 22/22 | chr8 | - | 7-28 | N/A | - | miRBase_13_0 | 18/34 | 4/50 |
66 | mdo-mir-181c | mir-181 | mdo-miR-181c | 23/23 | chr3 | - | 7-29 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
67 | mdo-mir-181b | mir-181 | mdo-miR-181b | 22/22 | chr2 | - | 13-34 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
68 | mdo-mir-181a | mir-181 | mdo-miR-181a | 23/23 | chr2 | - | 3-25 | N/A | - | miRBase_13_0 | 22/39 | 9/168 |
69 | mdo-mir-18 | mir-18 | mdo-miR-18 | 22/22 | chr7 | - | 7-28 | N/A | - | miRBase_13_0 | 24/37 | 1/57 |
70 | mdo-mir-17 | mir-17 | mdo-miR-17-3p | 21/21 | chr7 | - | 52-72 | N/A | - | miRBase_13_0 | 23/41 | 4/78 |
71 | mdo-mir-17 | mir-17 | mdo-miR-17-5p | 24/24 | chr7 | - | 14-37 | N/A | - | miRBase_13_0 | 23/41 | 4/78 |
72 | mdo-mir-16 | mir-16 | mdo-miR-16 | 22/22 | chr4 | + | 14-35 | N/A | - | miRBase_13_0 | 23/38 | 2/61 |
73 | mdo-mir-15a | mir-15 | mdo-miR-15a | 22/22 | chr4 | + | 14-35 | N/A | - | miRBase_13_0 | 23/37 | 2/69 |
74 | mdo-mir-1549 | mir-1549 | mdo-miR-1549 | 21/21 | chrUn | + | 40-60 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
75 | mdo-mir-1548 | mir-1548 | mdo-miR-1548 | 22/22 | chr2 | - | 37-58 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
76 | mdo-mir-1547 | mir-1547 | mdo-miR-1547 | 22/22 | chr4 | - | 17-38 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
77 | mdo-mir-1546 | mir-1546 | mdo-miR-1546 | 22/22 | chr3 | - | 16-37 | N/A | - | miRBase_13_0 | 1/2 | 2/3 |
78 | mdo-mir-1545 | mir-1545 | mdo-miR-1545 | 21/21 | chrX | - | 46-66 | N/A | - | miRBase_13_0 | 1/2 | 1/2 |
79 | mdo-mir-1544 | mir-1544 | mdo-miR-1544 | 22/22 | chrX | - | 13-34 | N/A | - | miRBase_13_0 | 1/1 | 1/1 |
80 | mdo-mir-1543 | mir-1543 | mdo-miR-1543 | 22/22 | chr1 | + | 47-68 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
81 | mdo-mir-1542-2 | mir-1542 | mdo-miR-1542 | 21/21 | chr8 | - | 51-71 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
82 | mdo-mir-1542-1 | mir-1542 | mdo-miR-1542 | 21/21 | chr8 | - | 47-67 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
83 | mdo-mir-1541 | mir-1541 | mdo-miR-1541 | 22/22 | chr4 | - | 11-32 | N/A | - | miRBase_13_0 | 1/2 | 2/3 |
84 | mdo-mir-1540 | mir-1540 | mdo-miR-1540 | 20/20 | chr1 | - | 10-29 | N/A | - | miRBase_13_0 | 1/1 | 2/2 |
85 | mdo-mir-152 | mir-152 | mdo-miR-152 | 22/22 | chr2 | - | 47-68 | N/A | - | miRBase_13_0 | 11/27 | 2/43 |
86 | mdo-mir-145 | mir-145 | mdo-miR-145 | 23/23 | chr1 | - | 7-29 | N/A | - | miRBase_13_0 | 15/29 | 2/32 |
87 | mdo-mir-144 | mir-144 | mdo-miR-144 | 22/22 | chr2 | - | 52-73 | N/A | - | miRBase_13_0 | 17/30 | 2/32 |
88 | mdo-mir-143 | mir-143 | mdo-miR-143 | 22/22 | chr1 | - | 40-61 | N/A | - | miRBase_13_0 | 15/29 | 2/33 |
89 | mdo-mir-142 | mir-142 | mdo-miR-142 | 23/23 | chr2 | + | 46-68 | N/A | - | miRBase_13_0 | 14/30 | 2/45 |
90 | mdo-mir-141 | mir-141 | mdo-miR-141 | 22/22 | chr8 | + | 41-62 | N/A | - | miRBase_13_0 | 14/29 | 3/41 |
91 | mdo-mir-138 | mir-138 | mdo-miR-138 | 17/17 | chr1 | + | 9-25 | N/A | - | miRBase_13_0 | 14/29 | 2/56 |
92 | mdo-mir-137 | mir-137 | mdo-miR-137 | 22/22 | chr2 | - | 29-50 | N/A | - | miRBase_13_0 | 24/47 | 3/69 |
93 | mdo-mir-135b | mir-135 | mdo-miR-135b | 22/22 | chr2 | - | 18-39 | N/A | - | miRBase_13_0 | 21/39 | 4/118 |
94 | mdo-mir-135a | mir-135 | mdo-miR-135a | 23/23 | chr8 | + | 23-45 | N/A | - | miRBase_13_0 | 21/39 | 4/118 |
95 | mdo-mir-133a | mir-133 | mdo-miR-133a | 22/22 | chr3 | + | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
96 | mdo-mir-132 | mir-132 | mdo-miR-132 | 22/22 | chr2 | - | 42-63 | N/A | - | miRBase_13_0 | 11/21 | 2/28 |
97 | mdo-mir-130a | mir-130 | mdo-miR-130a | 22/22 | chr5 | + | 49-70 | N/A | - | miRBase_13_0 | 18/35 | 3/71 |
98 | mdo-mir-129 | mir-129 | mdo-miR-129 | 22/22 | chr8 | + | 6-27 | N/A | - | miRBase_13_0 | 14/32 | 2/69 |
99 | mdo-mir-128 | mir-128 | mdo-miR-128 | 21/21 | chr6 | - | 52-72 | N/A | - | miRBase_13_0 | 19/36 | 3/66 |
100 | mdo-mir-125b-2 | mir-125 | mdo-miR-125b | 22/22 | chr4 | + | 3-24 | N/A | - | miRBase_13_0 | 45/62 | 5/195 |
101 | mdo-mir-125b-1 | mir-125 | mdo-miR-125b | 22/22 | chr4 | + | 12-33 | N/A | - | miRBase_13_0 | 45/62 | 5/195 |
102 | mdo-mir-124a-3 | mir-124 | mdo-miR-124a | 22/22 | chr1 | - | 43-64 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
103 | mdo-mir-124a-2 | mir-124 | mdo-miR-124a | 22/22 | chr3 | - | 56-77 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
104 | mdo-mir-124a-1 | mir-124 | mdo-miR-124a | 22/22 | chr1 | + | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 6/135 |
105 | mdo-mir-122 | mir-122 | mdo-miR-122 | 25/25 | chr3 | - | 9-33 | N/A | - | miRBase_13_0 | 15/27 | 2/31 |
106 | mdo-mir-10b | mir-10 | mdo-miR-10b | 23/23 | chr4 | + | 26-48 | N/A | - | miRBase_13_0 | 43/59 | 4/124 |
107 | mdo-mir-10a | mir-10 | mdo-miR-10a | 23/23 | chr2 | - | 15-37 | N/A | - | miRBase_13_0 | 43/59 | 4/124 |
108 | mdo-mir-107 | mir-107 | mdo-miR-107 | 23/23 | chr1 | + | 53-75 | N/A | - | miRBase_13_0 | 20/37 | 4/68 |
109 | mdo-mir-103-2 | mir-103 | mdo-miR-103 | 23/23 | chr1 | - | 50-72 | N/A | - | miRBase_13_0 | 21/38 | 6/118 |
110 | mdo-mir-103-1 | mir-103 | mdo-miR-103 | 23/23 | chr1 | - | 46-68 | N/A | - | miRBase_13_0 | 21/38 | 6/118 |
111 | mdo-mir-101-2 | mir-101 | mdo-miR-101 | 22/22 | chr6 | + | 49-70 | N/A | - | miRBase_13_0 | 23/40 | 4/76 |
112 | mdo-mir-101-1 | mir-101 | mdo-miR-101 | 22/22 | chr2 | + | 51-72 | N/A | - | miRBase_13_0 | 23/40 | 4/76 |
113 | mdo-mir-100 | mir-100 | mdo-miR-100 | 21/21 | chr4 | + | 13-33 | N/A | - | miRBase_13_0 | 39/56 | 2/88 |
114 | mdo-mir-1 | mir-1 | mdo-miR-1 | 21/21 | chr3 | + | 53-73 | N/A | - | miRBase_13_0 | 41/61 | 3/166 |
115 | mdo-let-7i | let-7 | mdo-let-7i | 21/21 | chr8 | + | 6-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
116 | mdo-let-7g | let-7 | mdo-let-7g | 21/21 | chr6 | + | 5-25 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
117 | mdo-let-7f-2 | let-7 | mdo-let-7f | 22/22 | chrUn | - | 5-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
118 | mdo-let-7f-1 | let-7 | mdo-let-7f | 22/22 | chr6 | - | 7-28 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
119 | mdo-let-7d | let-7 | mdo-let-7d | 21/21 | chr6 | - | 16-36 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
120 | mdo-let-7b | let-7 | mdo-let-7b | 22/22 | chr8 | - | 8-29 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
121 | mdo-let-7a-3 | let-7 | mdo-let-7a | 22/22 | chr8 | - | 5-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
122 | mdo-let-7a-2 | let-7 | mdo-let-7a | 22/22 | chr4 | + | 5-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
123 | mdo-let-7a-1 | let-7 | mdo-let-7a | 22/22 | chr6 | - | 15-36 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
Total | 123 record(s). |